Publication list - The laboratory of quantum photodynamics

@article{bezrukov2019computational184132070,

title = {Computational study of the stable atomic trapping sites in Ar lattice},

author = {Georgiy K. Ozerov and Dmitry S. Bezrukov and Alexei A. Buchachenko},

doi = {10.1063/1.5090045},

issn = {1090-6517; 1063-777X},

year  = {2019},

date = {2019-01-01},

journal = {Low Temperature Physics},

volume = {45},

number = {3},

pages = {301--309},

publisher = {United States},

address = {United States},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{bezrukov2019empirically225083067,

title = {Empirically Modified Potentials of Interaction between Rare Gases for Matrix Isolation Problems},

author = {D. S. Bezrukov and N. N. Kleshchina and I. S. Kalinina and A. A. Buchachenko},

doi = {10.1134/S003602441908003X},

issn = {1531-863X; 0036-0244},

year  = {2019},

date = {2019-01-01},

journal = {Russian Journal of Physical Chemistry A},

volume = {93},

number = {8},

pages = {1505--1512},

publisher = {Road Town, United Kingdom},

address = {Road Town, United Kingdom},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{aladinskaya2019identification194256782,

title = {Identification of N-Substituted Triazolo-azetidines as Novel Antibacterials using pDualrep2 HTS Platform},

author = {Yan A. Ivanenkov and Renat S. Yamidanov and Ilya A. Osterman and Petr V. Sergiev and Vladimir A. Aladinskiy and Anastasia V. Aladinskaya and Victor A. Terentiev and Mark S. Veselov and Andrey A. Ayginin and Dmitry A. Skvortsov and Katerina S. Komarova and Alexey V. Chemeris and Alexey Kh Baimiev and Alina A. Sofronova and Alexander S. Malyshev and Alexey E. Machulkin and Rostislav A. Petrov and Dmitry S. Bezrukov and Gleb I. Filkov and Maria M. Puchinina and Liana F. Zainullina and Marina A. Maximova and Zulfiya R. Zileeva and Yulia V. Vakhitova and Olga A. Dontsova},

doi = {10.2174/1386207322666190412165316},

issn = {1875-5402; 1386-2073},

year  = {2019},

date = {2019-01-01},

journal = {Combinatorial Chemistry and High Throughput Screening},

volume = {22},

number = {5},

pages = {346--354},

publisher = {Netherlands},

address = {Netherlands},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{aladinskaya2019identification229525151,

title = {Identification of Novel Antibacterials Using Machine Learning Techniques},

author = {Yan A. Ivanenkov and Alex Zhavoronkov and Renat S. Yamidanov and Ilya A. Osterman and Petr V. Sergiev and Vladimir A. Aladinskiy and Anastasia V. Aladinskaya and Victor A. Terentiev and Mark S. Veselov and Andrey A. Ayginin and Victor G. Kartsev and Dmitry A. Skvortsov and Alexey V. Chemeris and Alexey Kh Baimiev and Alina A. Sofronova and Alexander S. Malyshev and Gleb I. Filkov and Dmitry S. Bezrukov and Bogdan A. Zagribelnyy and Evgeny O. Putin and Maria M. Puchinina and Olga A. Dontsova},

doi = {10.3389/fphar.2019.00913},

issn = {1663-9812},

year  = {2019},

date = {2019-01-01},

journal = {Frontiers in pharmacology},

volume = {10},

pages = {e913},

publisher = {[Lausanne, Switzerland},

address = {[Lausanne, Switzerland},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{aladinskaya2019large-scale206133475,

title = {Large-scale high-throughput screening revealed 5'-(carbonylamino)-2,3'-bithiophene-4'-carboxylate as novel template for antibacterial agents},

author = {YA Ivanenkov and RS Yamidanov and IA Osterman and PV Sergiev and VA Aladinskiy and AV Aladinskaya and VA Terentiev and MS Veselov and AA Ayginin and DA Skvortsov and ES Komarova and BA Zagribelnyy and AK Baimiev and KY Shvetc and AA Sofronova and AE Machulkin and RA Petrov and LF Zainullina and MA Maximova and ZR Zileeva and YV Vakhitova and DS Bezrukov and MM Puchinina and OA Dontsova},

doi = {10.2174/1570163816666190603095521},

issn = {1570-1638},

year  = {2019},

date = {2019-01-01},

journal = {Current Drug Discovery Technologies},

publisher = {Netherlands},

address = {Netherlands},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{bezrukov2019stable239478502,

title = {Stable axially symmetric atomic impurity in an fcc solid-Ba in rare gases},

author = {N. N. Kleshchina and I. S. Kalinina and I. V. Leibin and D. S. Bezrukov and A. A. Buchachenko},

doi = {10.1063/1.5118876},

issn = {1089-7690; 0021-9606},

year  = {2019},

date = {2019-01-01},

journal = {Journal of Chemical Physics},

volume = {151},

pages = {121104-1--121104-6},

publisher = {United States},

address = {United States},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{aladinskaya2019substituted224521271,

title = {Substituted Furanocoumarins as Novel Class of Antibacterial Translation Inhibitors},

author = {Yan A. Ivanenkov and Renat S. Yamidanov and Ilya A. Osterman and Petr V. Sergiev and Andrey A. Ayginin and Vladimir A. Aladinskiy and Anastasia V. Aladinskaya and Victor A. Terentiev and Mark S. Veselov and Dmitry A. Skvortsov and Katerina S. Komarova and Alexey V. Chemeris and Liana F. Zainullina and Marina A. Maximova and Zulfiya R. Zileeva and Yulia V. Vakhitova and Alexey Kh Baimiev and Alina A. Sofronova and Alexey E. Machulkin and Rostislav A. Petrov and Dmitry S. Bezrukov and Maria M. Puchinina and Olga A. Dontsova and Dmitrii A. Lukianov},

doi = {10.2174/1386207322666190723110539},

issn = {1875-5402; 1386-2073},

year  = {2019},

date = {2019-01-01},

journal = {Combinatorial Chemistry and High Throughput Screening},

volume = {22},

number = {6},

pages = {400--410},

publisher = {Netherlands},

address = {Netherlands},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{aladinskaya2019synthesis90615155,

title = {Synthesis and Biological Evaluation of Doxorubicin-containing Conjugate targeting PSMA},

author = {Yan Ivanenkov and Alexey Machulkin and Anastasia Garanina and Dmitry Skvortsov and Anastasia Uspenskaya and Ekaterina Deyneka and Trofimenko Alexander and Elena Beloglazkina and Nikolay Zyk and Victor Koteliansky and Dmitry Bezrukov and Anastasia Aladinskaya and Nataliya Vorobyeva and Maria Puchinina and Grigory Riabykh and Alina Sofronova and Alexander Malyshev and Alexander Majouga},

doi = {10.1016/j.bmcl.2019.01.040},

issn = {1464-3405; 0960-894X},

year  = {2019},

date = {2019-01-01},

journal = {Bioorganic and Medicinal Chemistry Letters},

volume = {29},

number = {10},

pages = {1246--1255},

publisher = {United Kingdom},

address = {United Kingdom},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{lambo2019triplet219447442,

title = {Triplet emission of atomic ytterbium isolated in a xenon matrix},

author = {N. N. Kleshchina and I. S. Kalinina and R. Lambo and A. A. Buchachenko and D. S. Bezrukov and Hu S-M},

doi = {10.1063/1.5111293},

issn = {1090-6517; 1063-777X},

year  = {2019},

date = {2019-01-01},

journal = {Low Temperature Physics},

volume = {45},

pages = {707--714},

publisher = {United States},

address = {United States},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{vigasin2019simulation264634751,

title = {Simulation of collision-induced absorption spectra based on classical trajectories and ab initio potential and induced dipole surfaces. I. Case study of N2–N2 rototranslational band},

author = {Daniil N. Chistikov and Artem A. Finenko and Sergei E. Lokshtanov and Sergey V. Petrov and Andrey A. Vigasin},

doi = {10.1063/1.5125756},

issn = {1089-7690; 0021-9606},

year  = {2019},

date = {2019-01-01},

journal = {Journal of Chemical Physics},

volume = {151},

pages = {194106--194106-13},

publisher = {United States},

address = {United States},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{zaitsevskii2019spectroscopy237454985,

title = {Spectroscopy of Diatomic Molecules in Non-Adiabatic Approximation},

author = {E. A. Pazyuk and V. I. Pupyshev and A. V. Zaitsevskii and A. V. Stolyarov},

doi = {10.1134/s0036024419100200},

issn = {1531-863X; 0036-0244},

year  = {2019},

date = {2019-01-01},

journal = {Russian Journal of Physical Chemistry A},

volume = {93},

number = {10},

pages = {1865--1872},

publisher = {Road Town, United Kingdom},

address = {Road Town, United Kingdom},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{montgomery-jr2019on-the187068422,

title = {On the shell-confined atom problem},

author = {V. I. Pupyshev and H. E. Montgomery},

doi = {10.1002/qua.25887},

issn = {1097-461X; 0020-7608},

year  = {2019},

date = {2019-01-01},

journal = {International Journal of Quantum Chemistry},

volume = {119},

number = {10},

pages = {e25887-1--e25887-13},

publisher = {United States},

address = {United States},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{anstoter2018electronic145370793,

title = {Electronic structure of the para-dinitrobenzene radical anion: a combined 2D photoelectron imaging and computational study},

author = {Cate S Anstöter and Thomas E Gartmann and Laurence H Stanley and Anastasia V Bochenkova and R R Verlet Jan},

doi = {10.1039/C8CP04877K},

issn = {1463-9084; 1463-9076},

year  = {2018},

date = {2018-01-01},

journal = {Physical Chemistry Chemical Physics},

volume = {20},

number = {37},

pages = {24019--24026},

publisher = {United Kingdom},

address = {United Kingdom},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{andersen2018the-uv-visible105144692,

title = {The UV-visible action-absorption spectrum of all-trans and 11-cis protonated Schiff base retinal in the gas phase},

author = {Jeppe L Knudsen and Anika Kluge and Anastasia V Bochenkova and Hjalte V Kiefer and Lars H Andersen},

doi = {10.1039/C7CP07512J},

issn = {1463-9084; 1463-9076},

year  = {2018},

date = {2018-01-01},

journal = {Physical Chemistry Chemical Physics},

volume = {20},

number = {10},

pages = {7190--7194},

publisher = {United Kingdom},

address = {United Kingdom},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{vigasin2018comprehensive162289452,

title = {Comprehensive classical analysis of partition function and some observables for weakly interacting polyatomic dimers},

author = {Daniil N. Chistikov and Artem A. Finenko and Sergei E. Lokshtanov and Sergey V. Petrov and Andrey A. Vigasin},

doi = {10.1063/1.5054125},

issn = {1089-7690; 0021-9606},

year  = {2018},

date = {2018-01-01},

journal = {Journal of Chemical Physics},

volume = {149},

pages = {194304},

publisher = {United States},

address = {United States},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{andersen2017mechanism51429573,

title = {Mechanism of resonant electron emission from the deprotonated GFP chromophore and its biomimetics},

author = {Anastasia V Bochenkova and R S Mooney Ciaran and Michael A Parkes and Joanne L Woodhouse and Lijuan Zhang and Ross Lewin and John M Ward and Helen C Hailes and Lars H Andersen and Helen H Fielding},

doi = {10.1039/C6SC05529J},

issn = {2041-6539; 2041-6520},

year  = {2017},

date = {2017-01-01},

journal = {Chemical science},

volume = {8},

number = {4},

pages = {3154--3163},

publisher = {United Kingdom},

address = {United Kingdom},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{andersen2017the-origin60720907,

title = {The origin of the intrinsic fluorescence of the Green Fluorescent Protein},

author = {Annette Svendsen and Hjalte V Kiefer and Henrik B Pedersen and Anastasia V Bochenkova and Lars H Andersen},

doi = {10.1021/jacs.7b04987},

issn = {1520-5126; 0002-7863},

year  = {2017},

date = {2017-01-01},

journal = {Journal of the American Chemical Society},

volume = {139},

number = {25},

pages = {8766--8771},

publisher = {United States},

address = {United States},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{andersen2016a-pyp19818114,

title = {A PYP chromophore acts as a ’photoacid’ in an isolated hydrogen bonded complex},

author = {Lars H Andersen and Anastasia V Bochenkova and Jorgen Houmoller and Hjalte V Kiefer and Elie Lattouf and Mark H Stockett},

doi = {10.1039/C6CP00433D},

issn = {1463-9084; 1463-9076},

year  = {2016},

date = {2016-01-01},

journal = {Physical Chemistry Chemical Physics},

volume = {18},

number = {15},

pages = {9909--9913},

publisher = {United Kingdom},

address = {United Kingdom},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{andersen2016decoupling38609005,

title = {Decoupling Electronic versus Nuclear Photoresponse of Isolated Green Fluorescent Protein Chromophores Using Short Laser Pulses},

author = {Hjalte V Kiefer and Henrik B Pedersen and Anastasia V Bochenkova and Lars H Andersen},

doi = {10.1103/PhysRevLett.117.243004},

issn = {1079-7114; 0031-9007},

year  = {2016},

date = {2016-01-01},

journal = {Physical Review Letters},

volume = {117},

number = {24},

pages = {243004-1--243004-5},

publisher = {United States},

address = {United States},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{clemmer2015direct9604396,

title = {Direct Measurement of the Isomerization Barrier of the Isolated Retinal Chromophore},

author = {Jonathan Dilger and Lihi Musbat and Mordechai Sheves and Anastasia V Bochenkova and David E Clemmer and Yoni Toker},

doi = {10.1002/anie.201411894},

issn = {1521-3773; 1433-7851},

year  = {2015},

date = {2015-01-01},

journal = {Angewandte Chemie - International Edition},

volume = {54},

number = {16},

pages = {4748--4752},

publisher = {United Kingdom},

address = {United Kingdom},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{clemmer2015direct20325436,

title = {Direct Measurement of the Isomerization Barrier of the Isolated Retinal Chromophore},

author = {J Dilger and L Musbat and M Sheves and A V Bochenkova and D E Clemmer and Y Toker},

doi = {10.1088/1742-6596/635/3/032034},

issn = {1742-6596; 1742-6588},

year  = {2015},

date = {2015-01-01},

journal = {Journal of Physics: Conference Series},

volume = {635},

number = {3},

pages = {032034},

publisher = {United Kingdom},

address = {United Kingdom},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{bommarius2015hidden9604369,

title = {Hidden photoinduced reactivity of the blue fluorescent protein mKalama1},

author = {Russell B Vegh and Dmitry A Bloch and Andreas S Bommarius and Michael Verkhovsky and Sergei Pletnev and Hideo Iwai and Anastasia V Bochenkova and Kyril M Solntsev},

doi = {10.1039/C5CP00887E},

issn = {1463-9084; 1463-9076},

year  = {2015},

date = {2015-01-01},

journal = {Physical Chemistry Chemical Physics},

volume = {17},

number = {19},

pages = {12472--12485},

publisher = {United Kingdom},

address = {United Kingdom},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{andersen2015how-far10582562,

title = {How far can a single hydrogen bond tune the spectral properties of the GFP chromophore?},

author = {Hjalte V Kiefer and Elie Lattouf and Natascha W Persen and Anastasia V Bochenkova and Lars H Andersen},

doi = {10.1039/C5CP02764K},

issn = {1463-9084; 1463-9076},

year  = {2015},

date = {2015-01-01},

journal = {Physical Chemistry Chemical Physics},

volume = {17},

number = {31},

pages = {20056--20060},

publisher = {United Kingdom},

address = {United Kingdom},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{andersen2014uv-excited-state7327105,

title = {UV Excited-State Photoresponse of Biochromophore Negative Ions},

author = {Anastasia V Bochenkova and Benedikte Klaerke and Dennis B Rahbek and Jyoti Rajput and Yoni Toker and Lars H Andersen},

doi = {10.1002/anie.201404609},

issn = {1521-3773; 1433-7851},

year  = {2014},

date = {2014-01-01},

journal = {Angewandte Chemie - International Edition},

volume = {53},

number = {37},

pages = {9797--9801},

publisher = {United Kingdom},

address = {United Kingdom},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{andersen2013photoresponse7328329,

title = {Photoresponse of the protonated Schiff-base retinal chromophore in the gas phase},

author = {Y Toker and D B Rahbek and H V Kiefer and J Rajput and R Antoine and P Dugourd and S B Nielsen and A V Bochenkova and L H Andersen},

doi = {10.1039/C3CP51759D},

issn = {1463-9084; 1463-9076},

year  = {2013},

date = {2013-01-01},

journal = {Physical Chemistry Chemical Physics},

volume = {15},

number = {45},

pages = {19566--19569},

publisher = {United Kingdom},

address = {United Kingdom},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{andersen2013ultrafast4471810,

title = {Ultrafast dual photoresponse of isolated biological chromophores: link to the photoinduced mode-specific non-adiabatic dynamics in proteins},

author = {Anastasia V Bochenkova and Lars H Andersen},

doi = {10.1039/C3FD20150C},

issn = {1364-5498; 0301-7249; 1359-6640},

year  = {2013},

date = {2013-01-01},

journal = {Faraday Discussions},

volume = {163},

number = {0},

pages = {297--319},

publisher = {United Kingdom},

address = {United Kingdom},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{andersen2012direct1721512,

title = {Direct and Indirect Electron Emission from the Green Fluorescent Protein Chromophore},

author = {Y Toker and D B Rahbek and B Klærke and A V Bochenkova and L H Andersen},

doi = {10.1103/PhysRevLett.109.128101},

issn = {1079-7114; 0031-9007},

year  = {2012},

date = {2012-01-01},

journal = {Physical Review Letters},

volume = {109},

number = {12},

pages = {128101-01--128101-04},

publisher = {United States},

address = {United States},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{aravind2012photodissociation606357,

title = {Photodissociation pathways and lifetimes of protonated peptides and their dimers},

author = {G Aravind and B Klaerke and J Rajput and Y Toker and L H Andersen and A V Bochenkova and R Antoine and J Lemoine and A Racaud and P Dugourd},

doi = {10.1063/1.3671943},

issn = {1089-7690; 0021-9606},

year  = {2012},

date = {2012-01-01},

journal = {Journal of Chemical Physics},

volume = {136},

number = {1},

pages = {014307-01--014307-14},

publisher = {United States},

address = {United States},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{andersen2012probing1721630,

title = {Probing the Barrier for Internal Rotation of the Retinal Chromophore},

author = {Yoni Toker and Annette Svendsen and Anastasia V Bochenkova and Lars H Andersen},

doi = {10.1002/anie.201203746},

issn = {1521-3773; 1433-7851},

year  = {2012},

date = {2012-01-01},

journal = {Angewandte Chemie - International Edition},

volume = {51},

number = {35},

pages = {8757--8761},

publisher = {United Kingdom},

address = {United Kingdom},

keywords = {},

pubstate = {published},

tppubtype = {article}

}